Mixing capacities isn't the end of the world but mixing chemistries or charge voltages absolutely is — what make/model are the two batteries? That's the real question here.
If they're both LiFePO4 with the same charge voltage profile (typically 14.2–14.6v on a 12v system) then running them in parallel is generally fine. The 280ah and 320ah will balance themselves out reasonably well. You'll effectively have a 600ah bank and your BMS on each unit handles its own cell protection independently.
The gotcha is if one battery has a significantly lower internal resistance than the other — the newer or higher-spec unit tends to take a bigger share of charge/discharge current. Not catastrophic, but worth monitoring initially with a shunt or decent battery monitor. I ran mismatched Fogstar Drift cells in parallel for about eight months on my garden office setup and never had drama, though mine were closer in spec than yours.
What I would check:
- Both batteries showing same resting voltage before paralleling (within 0.1v ideally)
- Same BMS cutoff voltages configured
- Fuse each battery individually before the parallel join — this is non-negotiable
The capacity difference of 40ah is genuinely not a big deal. It's more of a curiosity than a problem. Where people come unstuck is chucking a lithium next to an old AGM or mixing a budget cell with a premium one that has wildly different internal resistance figures.
What's your charging source — solar, mains, alternator? That might change the advice slightly.